Directory mrLoadRet/File/

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Most Recent Commits

justin 2010-07-16 15:47 Rev.: 1699

Adding code that should calculate l/r flipping. Keeping commented for now.

30 lines of code changed in 1 file:

• mrLoadRet/File: loadAnat.m (+30 -1)

tsliu 2010-03-12 02:17 Rev.: 1672

No need to make Anal directory in the new empty directory

1 lines of code changed in 1 file:

• mrLoadRet/File: makeEmptyMLRDir.m (+1 -1)

justin 2010-01-28 11:29 Rev.: 1629

Checking for bad filenames

5 lines of code changed in 1 file:

• mrLoadRet/File: importTSeries.m (+5)

tsliu 2010-01-15 23:55 Rev.: 1624

fixed the group made if called with a different default group name (it was always making the 'Raw' group)

1 lines of code changed in 1 file:

• mrLoadRet/File: makeEmptyMLRDir.m (+1 -1)

justin 2010-01-07 17:45 Rev.: 1617

ALlowing for hard links

14 lines of code changed in 1 file:

• mrLoadRet/File: importGroupScans.m (+14 -2)

eli 2009-12-18 02:39 Rev.: 1606

Added an option to import both right and left hemisphere surfaces. If bothHemiFlag is set to 1, then the function loads the inner and outer surfaces for both hemispheres, concatenates them together, and creates a single baseAnat with both hemispheres. Having both hemispheres loaded up in MLR is convenient for data viewing and it makes extending/restricting ROI's easier when the ROI exists in both hemispheres. Still need to add a hook in MLR GUI to make bothHemiFlag an option.

96 lines of code changed in 1 file:

• mrLoadRet/File: importSurfaceOFF.m (+96 -30)

justin 2009-12-17 22:35 Rev.: 1602

Allow for default arguments so that you don't have to have a dialog box come up

17 lines of code changed in 1 file:

• mrLoadRet/File: makeEmptyMLRDir.m (+17 -7)

justin 2009-12-11 23:16 Rev.: 1590

Import the tSeries by having saveNewTSeries reload the nifti file. This makes sure that scanParams info gets pulled from the nifti file. Otherwise it was losing sform/qform, pixdim info etc.

2 lines of code changed in 1 file:

• mrLoadRet/File: importTSeries.m (+2 -2)

justin 2009-12-11 17:52 Rev.: 1587

error dialogs changed to mrErrorDlg

4 lines of code changed in 1 file:

• mrLoadRet/File: loadSurfOFF.m (+4 -4)

justin 2009-12-11 16:05 Rev.: 1581

Checks input arguments and is more flexible about names - i.e. adds default nifti extension if ommitted. Analysis name can omit directory name if same as analysis name

15 lines of code changed in 2 files:

• mrLoadRet/File: loadAnalysis.m (+7), loadAnat.m (+8 -3)

justin 2009-12-11 11:30 Rev.: 1578

adding dry-run

24 lines of code changed in 1 file:

• mrLoadRet/File: mlrFixPermissions.m (+24 -15)

justin 2009-12-11 11:29 Rev.: 1577

preallocate space for ROIs. Speeds up loading quite a bit....

3 lines of code changed in 1 file:

• mrLoadRet/File: loadROITSeries.m (+3 -1)

justin 2009-12-03 21:45 Rev.: 1559

Call with path to surface

10 lines of code changed in 1 file:

• mrLoadRet/File: importSurfaceOFF.m (+10 -8)

justin 2009-12-03 21:44 Rev.: 1558

Check for proper command line arguments

4 lines of code changed in 1 file:

• mrLoadRet/File: writeOFF.m (+4)

justin 2009-10-15 21:34 Rev.: 1539

Check for mrSession in dir first

9 lines of code changed in 1 file:

• mrLoadRet/File: mlrFixPermissions.m (+9 -2)

justin 2009-10-15 21:32 Rev.: 1538

Function to recursively fix mlr session file permissions

92 lines of code changed in 1 file:

• mrLoadRet/File: mlrFixPermissions.m (new 92)

tsliu 2009-09-25 11:24 Rev.: 1530

added option so that one can make a empty MLR directory with MotionComp group

8 lines of code changed in 1 file:

• mrLoadRet/File: makeEmptyMLRDir.m (+8 -5)

justin 2009-07-14 16:31 Rev.: 1511

Export of an roi to a nifti file

54 lines of code changed in 1 file:

• mrLoadRet/File: mlrExportROI.m (new 54)

justin 2009-07-09 09:56 Rev.: 1506

Save anat as float32 instead of default -- otherwise if the data type was set uint8 for example, the surfaces were not saving with the full grayscale range

2 lines of code changed in 1 file:

• mrLoadRet/File: saveAnat.m (+2 -2)

justin 2009-07-03 16:44 Rev.: 1494

added function to importTseries

56 lines of code changed in 1 file:

• mrLoadRet/File: importTSeries.m (new 56)

(222 more)