November 2008 Commit Log

Number of Commits:

34

Number of Active Developers:

2

justin 2008-11-29 23:26 #34 Rev.: 1347

scanInfo now accepts a return argument for a structure that contains all the info fields for the scan

6 lines of code changed in 1 file:

• mrLoadRet/File: scanInfo.m (+6 -2)

justin 2008-11-29 13:23 #33 Rev.: 1346

minor: changes accepted number of input arguments

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/AverageTSeries: averageTSeries.m (+1 -1)

justin 2008-11-29 10:19 #32 Rev.: 1345

apply filtering default set to on since that is what we think is the _right_ thing to do...

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: eventRelatedGUI.m (+1 -1)

justin 2008-11-29 10:18 #31 Rev.: 1344

Change to warning dialog that tells you how to compute curvature -- i.e. added calcCurvature

1 lines of code changed in 1 file:

• mrLoadRet/GUI: mrSurfViewer.m (+1 -1)

justin 2008-11-29 09:54 #30 Rev.: 1343

beefed up viewGet scanNumFromDescription to do better searches of descriptions to get scan numbers. See viewGet([],'scanNumFromDescription','help') for more info

66 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+66 -11)

justin 2008-11-25 08:17 #29 Rev.: 1342

fixed a place in which the code was not calling getPermutationMatrix, but doing the computation locally.

1 lines of code changed in 1 file:

• mrAlign: mrAlignGUI.m (+1 -2)

justin 2008-11-25 08:15 #28 Rev.: 1341

Some slice perscriptions were getting weird results for what happens when you click the coronal/sagittal/axial radio buttons. I think this is because the slices are tilted backwards, and the permutation logic assigns what should really be the coronal view to the axial view. I have added a fix in here, which looks for slices that are rotated in this way and fixes the permutation matrix accordingly. I am not 100% sure that this will work for all slice orientations.

30 lines of code changed in 1 file:

• mrUtilities/File/Nifti: getPermutationMatrix.m (+30 -4)

justin 2008-11-25 08:11 #27 Rev.: 1340

Added support for stimfiles which consist only of the stimvol cell array (and optionally a stimNames cell array)

25 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: getStimvol.m (+25 -3)

justin 2008-11-25 08:10 #26 Rev.: 1339

Made asking about making a readme.txt file an option

8 lines of code changed in 1 file:

• mrLoadRet/Init: mrInit.m (+8 -3)

justin 2008-11-25 08:09 #25 Rev.: 1338

added support for stimfiles that consist of just the stimvol cell array

5 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+5 -1)

justin 2008-11-25 08:08 #24 Rev.: 1337

added ability to guess correct filenames for files name xxxOuter and xxxInner

4 lines of code changed in 1 file:

• mrLoadRet/GUI: mrSurfViewer.m (+4)

justin 2008-11-24 13:43 #23 Rev.: 1336

added link to wikipedia page

1 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: rot2euler.m (+1 -1)

justin 2008-11-24 13:42 #22 Rev.: 1335

helper function to return euler angles from rotation matrix

19 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: rot2euler.m (new 19)

justin 2008-11-23 06:19 #21 Rev.: 1334

Helper function that creates a 3D rotation matrix based on euler angles

46 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: makeRotMatrix3D.m (new 46)

justin 2008-11-18 07:47 #20 Rev.: 1333

Get calling function name correctly

6 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: getArgs.m (+6 -1)

justin 2008-11-18 07:46 #19 Rev.: 1332

check in setting curGroup to check for out of bounds scan number

3 lines of code changed in 1 file:

• mrLoadRet/View: viewSet.m (+3 -2)

justin 2008-11-18 07:45 #18 Rev.: 1331

changed minor variable check to be more general..

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: getStimvol.m (+1 -1)

justin 2008-11-18 07:44 #17 Rev.: 1330

fixed typo

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: getEventRelatedVarname.m (+1 -1)

justin 2008-11-18 07:40 #16 Rev.: 1329

Fix to keep interrogator from complaining if no bases are loaded

6 lines of code changed in 1 file:

• mrLoadRet/GUI: mrInterrogator.m (+6)

justin 2008-11-18 07:39 #15 Rev.: 1328

fixed typo so that Display on surface button works properly

1 lines of code changed in 1 file:

• mrLoadRet/File: baseInfo.m (+1 -1)

eli 2008-11-11 13:58 #14 Rev.: 1327

MLR seems to have survived a stress-test with Matlab 7.7

1 lines of code changed in 1 file:

• mrLoadRet: mrLoadRetVersion.m (+1 -1)

justin 2008-11-08 11:50 #13

fixing -kb flag

0 lines of code changed in 6 files:

• mrLoadRet/Analysis/AverageTSeries: averageTSeriesGUI.fig (new)
• mrLoadRet/Analysis/CorAnal: corAnalGUI.fig (changed)
• mrLoadRet/Analysis/MotionComp: motionCompGUI.fig (changed)

justin 2008-11-08 11:44 #12 Rev.: 1324

adding back fig files with -kb flag set

0 lines of code changed in 3 files:

• mrLoadRet/Edit: editBaseGUI.fig (new), editGroupGUI.fig (new), editSessionGUI.fig (new)

justin 2008-11-08 11:43 #11 Rev.: 1323

resetting files to have -kb flag set

0 lines of code changed in 3 files:

• mrLoadRet/Edit: editBaseGUI.fig (changed), editGroupGUI.fig (changed), editSessionGUI.fig (changed)

justin 2008-11-06 05:04 #10 Rev.: 1322

alternative ways to get nFrames -- i.e. numFrames, nVolumes numVolumes

1 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+1 -1)

justin 2008-11-05 06:48 #9 Rev.: 1321

Allow multiple arguments to be passed

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/ConcatTSeries: concatTSeries.m (+1 -1)

justin 2008-11-05 06:48 #8 Rev.: 1320

fixing minor issue with displaying stim names

8 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: eventRelatedPlot.m (+8 -3)

justin 2008-11-05 06:47 #7 Rev.: 1319

Display whether filtering was applied in GUI

3 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: eventRelatedGUI.m (+3)

justin 2008-11-05 06:47 #6 Rev.: 1318

Minor -- allow for multiple argument passing

1 lines of code changed in 1 file:

• mrLoadRet/Analysis/EventRelated: eventRelated.m (+1 -1)

justin 2008-11-05 06:46 #5 Rev.: 1317

Allow setting multiple range/clip/cmap/colormapTypes for each overlay

25 lines of code changed in 1 file:

• mrLoadRet/Analysis/QuickAnalysis: mrDispOverlay.m (+25 -5)

justin 2008-11-05 06:45 #4 Rev.: 1316

Allow selecting multiple anatomies to load at one time

75 lines of code changed in 1 file:

• mrLoadRet/File: loadAnat.m (+75 -71)

justin 2008-11-05 06:45 #3 Rev.: 1315

Added ability to get scanNum from seraching the description strings

24 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+24 -6)

justin 2008-11-03 09:12 #2 Rev.: 1314

removing -- just a test for cvs2svn

0 lines of code changed in 1 file:

• mrLoadRet: testfun.m (del)

justin 2008-11-03 06:44 #1 Rev.: 1313

empty file -- using to test cvs2svn conversion

0 lines of code changed in 1 file:

• mrLoadRet: testfun.m (new)

October 2008 »