December 2007 Commit Log

Number of Commits:

63

Number of Active Developers:

3

justin 2007-12-22 05:33 #63 Rev.: 856

minor fix to make rotate text box work

6 lines of code changed in 2 files:

• mrLoadRet/GUI: mlrGuiSet.m (+1 -1), mrLoadRetGUI.m (+5 -2)

justin 2007-12-22 05:26 #62 Rev.: 855

added tilt field to base for surfaces and appropriate viewGet and viewSet

41 lines of code changed in 3 files:

• mrLoadRet/View: isbase.m (+2 -1), viewGet.m (+16), viewSet.m (+23 -18)

justin 2007-12-22 05:25 #61 Rev.: 854

Put base gamma on main gui and added a tilt slider for 3D surfaces

48 lines of code changed in 4 files:

• mrLoadRet/GUI: mlrGuiSet.m (+15 -32), mrLoadRetGUI.fig (changed), mrLoadRetGUI.m (+32 -25), refreshMLRDisplay.m (+1 -1)

justin 2007-12-22 05:25 #60 Rev.: 853

function to change the view angle for 3D surfaces

36 lines of code changed in 1 file:

• mrLoadRet/GUI: setMLRViewAngle.m (new 36)

justin 2007-12-22 01:44 #59 Rev.: 852

viewGet / viewSet for getting baseAnatomy sform and sform_code

49 lines of code changed in 2 files:

• mrLoadRet/View: viewGet.m (+19), viewSet.m (+30)

justin 2007-12-22 01:44 #58 Rev.: 851

added transforms menu for edit/base anatomy

107 lines of code changed in 2 files:

• mrLoadRet/GUI: mrLoadRetGUI.fig (changed), mrLoadRetGUI.m (+107 -16)

justin 2007-12-22 01:44 #57 Rev.: 850

displays sform_code of base anatomy

2 lines of code changed in 1 file:

• mrLoadRet/File: baseInfo.m (+2)

justin 2007-12-22 01:02 #56 Rev.: 849

Function that returns the view associated with the MLR gui

41 lines of code changed in 1 file:

• mrLoadRet/View: getMLRView.m (new 41)

eli 2007-12-21 03:22 #55 Rev.: 848

initial import of calcDist

154 lines of code changed in 1 file:

• mrLoadRet/Analysis: calcDist.m (new 154)

eli 2007-12-21 03:21 #54 Rev.: 847

fixed calcDist

3 lines of code changed in 1 file:

• mrLoadRet/GUI: mrLoadRetGUI.m (+3 -2)

justin 2007-12-20 05:06 #53 Rev.: 846

fixed some issues with choosing files

15 lines of code changed in 2 files:

• mrLoadRet/File: loadFlatOFF.m (-1)
• mrLoadRet/GUI: mrFlatViewer.m (+15 -14)

justin 2007-12-20 01:58 #52 Rev.: 845

minor fix (changed a && to &)

1 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+1 -1)

justin 2007-12-20 01:52 #51 Rev.: 844

minor fixes, callback now happens after setting values.

16 lines of code changed in 2 files:

• mrUtilities/MatlabUtilities: mrParamsDialog.m (+13 -11), mrParamsParse.m (+3)

justin 2007-12-20 01:52 #50 Rev.: 843

added gamma

8 lines of code changed in 1 file:

• mrUtilities/ImageProcessing: rescale2rgb.m (+8 -3)

justin 2007-12-20 01:51 #49 Rev.: 842

changed editBase

2 lines of code changed in 1 file:

• mrLoadRet/GUI: mrLoadRetGUI.m (+2 -2)

justin 2007-12-20 01:50 #48 Rev.: 841

minor bug

1 lines of code changed in 1 file:

• mrLoadRet/File: loadFlatOFF.m (+1 -4)

justin 2007-12-20 01:50 #47 Rev.: 840

dispays clip values and gammma

17 lines of code changed in 1 file:

• mrLoadRet/File: baseInfo.m (+17 -11)

justin 2007-12-20 01:50 #46 Rev.: 839

graceful quit when there is no overlay

2 lines of code changed in 1 file:

• mrLoadRet/Edit: editOverlayGUImrParams.m (+2)

justin 2007-12-20 01:49 #45 Rev.: 838

mrParamsDialog
now can update clip values and gamma

73 lines of code changed in 1 file:

• mrLoadRet/Edit: editBaseGUI.m (+73 -97)

justin 2007-12-20 01:49 #44 Rev.: 837

some changes for baseGamma

35 lines of code changed in 2 files:

• mrLoadRet/View: viewGet.m (+18 -1), viewSet.m (+17 -4)

justin 2007-12-20 01:48 #43 Rev.: 836

base gamma added

3 lines of code changed in 1 file:

• mrLoadRet/View: isbase.m (+3 -2)

justin 2007-12-20 01:48 #42 Rev.: 835

setting gamma on base anatomy

3 lines of code changed in 1 file:

• mrLoadRet/GUI: refreshMLRDisplay.m (+3 -2)

justin 2007-12-20 01:48 #41 Rev.: 834

check on params to avoid crashing

1 lines of code changed in 1 file:

• mrLoadRet/GUI: mrPrint.m (+1 -1)

justin 2007-12-20 01:47 #40 Rev.: 833

left on some more choices for rois with surfaces

8 lines of code changed in 1 file:

• mrLoadRet/GUI: mlrGuiSet.m (+8 -8)

justin 2007-12-20 01:47 #39 Rev.: 832

fixed bug with default coloring

3 lines of code changed in 1 file:

• mrLoadRet/GUI: mrFlatViewer.m (+3 -1)

justin 2007-12-19 23:55 #38 Rev.: 831

fixed merge conflict

1 lines of code changed in 1 file:

• mrLoadRet/File: loadFlatOFF.m (+1 -1)

justin 2007-12-19 21:16 #37 Rev.: 830

setting same structure names as loadFlatOFF

8 lines of code changed in 1 file:

• mrLoadRet/File: loadSurface.m (+8 -3)

justin 2007-12-19 21:16 #36 Rev.: 829

check for user cancel

2 lines of code changed in 1 file:

• mrLoadRet/File: loadFlatOFF.m (+2)

justin 2007-12-19 21:16 #35 Rev.: 828

rationalizing file names and surface info

13 lines of code changed in 1 file:

• mrLoadRet/File: baseInfo.m (+13 -2)

justin 2007-12-19 21:15 #34 Rev.: 827

check for missing functions in calculate distance menu item

6 lines of code changed in 1 file:

• mrLoadRet/GUI: mrLoadRetGUI.m (+6 -2)

justin 2007-12-19 21:15 #33 Rev.: 826

choose correct object for surfaces so that we can compute the coordinates coorectly

7 lines of code changed in 1 file:

• mrLoadRet/GUI: mrInterrogator.m (+7 -2)

justin 2007-12-19 21:14 #32 Rev.: 825

small changes to handle directories better

4 lines of code changed in 1 file:

• mrLoadRet/GUI: mrFlatViewer.m (+4 -4)

eli 2007-12-19 08:50 #31 Rev.: 824

recompiled, and now works with 'circular' edge handling

0 lines of code changed in 1 file:

• mrUtilities/ImageProcessing: upConv.mexmaci (changed)

justin 2007-12-19 06:02 #30 Rev.: 823

some file utilities

52 lines of code changed in 2 files:

• mrUtilities/MatlabUtilities: getRelativePath.m (new 51), isCurrentPath.m (+1 -3)

justin 2007-12-19 06:02 #29 Rev.: 822

mrFlatViewer and mrSurfViewer can handle being called from non-flat directories now

88 lines of code changed in 2 files:

• mrLoadRet/GUI: mrFlatViewer.m (+87 -30), mrSurfViewer.m (+1 -11)

shani 2007-12-19 05:35 #28 Rev.: 821

Calculate baseCoords using the new viewGet(v,'mouseDownBaseCoords')
Also fixed some bugs

5 lines of code changed in 1 file:

• mrLoadRet/Analysis: makeFlat.m (+5 -6)

justin 2007-12-19 04:44 #27 Rev.: 820

strips file separator from path

20 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: stripfilesep.m (new 20)

justin 2007-12-19 04:27 #26 Rev.: 819

checks to see if path is current path

24 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: isCurrentPath.m (new 24)

justin 2007-12-19 04:21 #25 Rev.: 818

Can now load from a non-flat directory

21 lines of code changed in 1 file:

• mrLoadRet/GUI: mrSurfViewer.m (+21 -9)

justin 2007-12-19 04:10 #24 Rev.: 817

Gives warning if you do not have a surface curvature .vff file.
Also adds Find file

41 lines of code changed in 1 file:

• mrLoadRet/GUI: mrSurfViewer.m (+41 -6)

justin 2007-12-19 04:09 #23 Rev.: 816

title says load outer surface now

1 lines of code changed in 1 file:

• mrLoadRet/File: loadSurface.m (+1 -1)

eli 2007-12-19 03:37 #22 Rev.: 815

initial upload

0 lines of code changed in 1 file:

• mrUtilities/ImageProcessing: upConv.mexmaci (new)

justin 2007-12-19 03:08 #21 Rev.: 814

Show the voxel on the 3D surface

27 lines of code changed in 1 file:

• mrLoadRet/Analysis: searchForVoxel.m (+27 -14)

justin 2007-12-19 03:02 #20 Rev.: 813

fix to getting the mouse coordinates on surfaces

1 lines of code changed in 1 file:

• mrLoadRet/GUI: mrInterrogator.m (+1 -1)

justin 2007-12-19 03:02 #19 Rev.: 812

baseSurfaceDims gets the underlying dimensions of the surface

19 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+19)

justin 2007-12-19 02:11 #18 Rev.: 811

saves the coordinates where the mouse was last clicked for access by the interrogator

7 lines of code changed in 1 file:

• mrLoadRet/GUI: mrInterrogator.m (+7 -1)

justin 2007-12-19 02:11 #17 Rev.: 810

viewGet to get mouseDownBaseCoords and mouseDownScanCoords, the coordinates that the mouse was last clicked on with the interrogator

20 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+20)

justin 2007-12-19 00:12 #16 Rev.: 809

changes needed to make scripting work. doing v = newView, then v = loadAnat did nt work since a) caches needed to be initialized in newView b) Some viewGet commands pulled values off the GUI to work (curSlice and sliceOrientation), now these return default values

22 lines of code changed in 3 files:

• mrLoadRet/View: mrOpenWindow.m (-5), newView.m (+6 -1), viewGet.m (+16 -4)

justin 2007-12-18 23:27 #15 Rev.: 808

fix for help dialog missing some lines

53 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: mrParamsDialog.m (+53 -20)

justin 2007-12-18 23:26 #14 Rev.: 807

check for file fix

1 lines of code changed in 1 file:

• mrLoadRet/GUI: mrFlatViewer.m (+1 -1)

eli 2007-12-15 00:11 #13 Rev.: 806

lots of changes to make the flattening code work with the flatViewer

73 lines of code changed in 2 files:

• mrLoadRet/Analysis: makeFlat.m (+5 -5)
• mrLoadRet/File: loadFlatOFF.m (+68 -34)

justin 2007-12-07 10:43 #12 Rev.: 805

More informative error message

1 lines of code changed in 1 file:

• mrUtilities/File/Nifti: cbiReadNifti.m (+1 -1)

justin 2007-12-07 10:42 #11 Rev.: 804

minor change to error message

1 lines of code changed in 1 file:

• mrLoadRet/View: viewGet.m (+1 -1)

justin 2007-12-07 10:41 #10 Rev.: 803

Check for mgl for stim files that use the function getTaskParameters, that way we can die with a useful message if they don't have mgl in their path.

6 lines of code changed in 2 files:

• mrLoadRet/Analysis/EventRelated: eventRelatedGUI.m (+3), eventRelatedGlmGUI.m (+3)

justin 2007-12-07 10:39 #9 Rev.: 802

Added optional arguments for scripting (justGetParams and defaultParams)

25 lines of code changed in 2 files:

• mrLoadRet/Analysis/CorAnal: corAnal.m (+23 -1), corAnalReconcileParams.m (+2 -2)

justin 2007-12-07 10:39 #8 Rev.: 801

Added parameters to make scripting easier, and congruent with concatTSeries and eventRelated (i.e. justGetParams, defaultParams and scanNums optional arguments)

38 lines of code changed in 2 files:

• mrLoadRet/Analysis/AverageTSeries: averageTSeries.m (+27 -1), averageTSeriesReconcileParams.m (+11 -3)

eli 2007-12-06 07:01 #7 Rev.: 800

*** empty log message ***

3 lines of code changed in 1 file:

• mrLoadRet/File: writeOFF.m (+3)

eli 2007-12-06 06:54 #6

*** empty log message ***

13 lines of code changed in 4 files:

• mrLoadRet/File: writeOFF.m (+1 -1)

eli 2007-12-06 06:46 #5 Rev.: 795

can now write surfaces

24 lines of code changed in 1 file:

• mrLoadRet/File: writeOFF.m (new 24)

eli 2007-12-04 23:40 #4 Rev.: 794

added line roi and calcDist

99 lines of code changed in 3 files:

• mrLoadRet/GUI: mrLoadRetGUI.fig (changed), mrLoadRetGUI.m (+41 -1), mrPrint.m (+58 -41)

justin 2007-12-04 17:48 #3 Rev.: 793

*** empty log message ***

0 lines of code changed in 1 file:

• mrUtilities/MatlabUtilities: mrDisp.mexsol (new)

eli 2007-12-02 04:53 #2

import from MLR3.X

48 lines of code changed in 2 files:

• mrLoadRet/ROI: findLinePoints.m (+2 -1)

eli 2007-12-02 04:50 #1 Rev.: 790

added line roi

91 lines of code changed in 1 file:

• mrLoadRet/ROI: drawROI.m (+91 -64)

November 2007 »